WGCNA

WGCNA运行完成,但文件夹下就一个html文件无其他。打开显示wgcna未完成。

用cmd自测

C:\Users\feng\Desktop\ov\cox\09WGCNA\pre>"D:\soft\R\R-3.6.0\bin\Rscript.exe" "D:\Sanger_V1.0.8_full64\source\softs\5c7344303916c\WGCNA_Pipline.R" "C:\Users\feng\Desktop\ov\cox\09WGCNA\pre" "success_success_top50varexpEX0102111.txt" " " "0" "30" "unsigned" "5000" "0.25" "0.9" "2" "0.02" "-1" "1"

WGCNA

dynamicTreeCut

fastcluster


'fastcluster'


The following object is masked from 'package:stats':


    hclust




'WGCNA'


The following object is masked from 'package:stats':


    cor


Warning message:

'WGCNA'R3.6.2

[1] "success_success_top50varexpEX0102111.txt"

[1] " "

Error in file(file, "rt") :

Calls: read.csv -> read.table -> file

: Warning message:

In file(file, "rt") :

  'success_success_top50varexpEX0102111.txt': No such file or directory

求大神帮忙

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