source("https://bioconductor.org/biocLite.R")
biocLite('scde')
library(scde)
data(es.mef.small)
cd <- clean.counts(es.mef.small, min.lib.size=1000, min.reads = 1, min.detected = 1)
sg <- factor(gsub("(MEF|ESC).*", "\\1", colnames(cd)), levels = c("ESC", "MEF"))
names(sg) <- colnames(cd)
#以上命令都能成功运行
o.ifm <- scde.error.models(counts = cd, groups = sg, n.cores = 10, threshold.segmentation = TRUE)
#运行此命令时报错如下：
Error in FUN(X[[i]], ...) :
trying to get slot "logLik" from an object of a basic class ("function") with no slots
自我检查：
1，R版本和SCDE包不冲突，library正常，所依赖的包都有
2，以为是命令引起程序误会，使用scde::scde.error.models 命令也不可以
请求大神赐教
