WGCNA运行完成,但文件夹下就一个html文件无其他。打开显示wgcna未完成。
用cmd自测
C:\Users\feng\Desktop\ov\cox\09WGCNA\pre>"D:\soft\R\R-3.6.0\bin\Rscript.exe" "D:\Sanger_V1.0.8_full64\source\softs\5c7344303916c\WGCNA_Pipline.R" "C:\Users\feng\Desktop\ov\cox\09WGCNA\pre" "success_success_top50varexpEX0102111.txt" " " "0" "30" "unsigned" "5000" "0.25" "0.9" "2" "0.02" "-1" "1"
WGCNA
dynamicTreeCut
fastcluster
'fastcluster'
The following object is masked from 'package:stats':
hclust
'WGCNA'
The following object is masked from 'package:stats':
cor
Warning message:
'WGCNA'R3.6.2
[1] "success_success_top50varexpEX0102111.txt"
[1] " "
Error in file(file, "rt") :
Calls: read.csv -> read.table -> file
: Warning message:
In file(file, "rt") :
'success_success_top50varexpEX0102111.txt': No such file or directory
求大神帮忙