用soapsnp call snp 报错怎么解决？谢谢谢谢

命令：~/biosoft/SOAPsnpZ/soapsnp -i chr01.sorted -d /disk3/wangshaobo/refnippon/IRGSPb5.fa -o chr01.snp.cns

错误信息：Reading Chromosome and dbSNP information Done.

terminate called after throwing an instance of 'std::out_of_range'
  what():  basic_string::substr: __pos (which is 63) > this->size() (which is 45)
Aborted (core dumped)

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默认排序时间排序

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生信菜鸟团 - 博士在读 2017-06-06 17:31

为什么不用GATK的best practise 呢？这个soapsnp只有BGI那些人才用的吧

davexu - bioinformatics 2017-08-18 16:57

貌似是多年前的错误？我找到了这个错误可能的报错原因。有兴趣知道，可以联系我邮箱xhs.m.g@163.com

用soapsnp call snp 报错怎么解决？ 谢谢谢谢

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用soapsnp call snp 报错怎么解决？谢谢谢谢