收藏|已公布的三代全长转录组数据

目前已发表的三代全长转录组数据。

目前以Pacbio为检索词，在NCBI中共检索到下面物种具有全长转录组数据，因而依靠这些数据我么可以干这些事：

１．某个特定基因全长序列的获得，不用再用RACE实验获取了，简单省事．

２．可变剪接的获得．比起二代将会更加直接．

３．基因模型优化．不用再害怕这个基因预测不准了，直截了当．

表格如下


更新日期ScientificName中文名字BioProject
2017/5/24Pyropia haitanensis坛紫菜PRJNA386620
2015/12/1Homo sapiens智人PRJNA290542
2013/9/30Human immunodeficienc人免疫缺PRJNA217811
2012/8/1HIV-1 M:B_89.6SRX159797SRR528849
2012/8/1HIV-1 M:B_89.6SRX159796SRR528848
2012/8/1HIV-1 M:B_89.6SRX159796SRR528843
2016/11/23Arabidopsis thaliana拟南芥PRJNA323955
2012/8/1HIV-1 M:B_89.6SRX159795SRR528841
2012/8/1HIV-1 M:B_89.6SRX159794SRR528840
2012/8/1HIV-1 M:B_89.6SRX159796SRR528847
2012/8/1HIV-1 M:B_89.6SRX159796SRR528846
2012/8/1HIV-1 M:B_89.6SRX159796SRR528845
2012/8/1HIV-1 M:B_89.6SRX159796SRR528844
2017/2/21Sus scrofa野猪PRJNA351265
2015/7/22Gallus gallus原鸡PRJNA239269
2016/4/13Homo sapiens智人PRJEB11818
2016/1/27Homo sapiens智人PRJNA309663
2016/6/5Homo sapiens智人PRJEB13749
2014/12/11Triticum aestivum面包小麦PRJNA222535
2016/5/4Suid herpesvirus 1 strain猪疱疹病PRJEB12867
2012/8/1HIV-1 M:B_89.6SRX159797SRR528850
2012/8/1HIV-1 M:B_89.6SRX159797SRR528851
2012/8/1HIV-1 M:B_89.6SRX159797SRR528852
2013/8/1HIV-1 M:B_89.6SRX159784SRR528799
2012/8/1HIV-1 M:B_89.6SRX159784SRR528798
2016/12/23Plicaturopsis crispa皱褶革菌PRJNA355565
2015/2/13Human immunodeficienc人免疫缺PRJNA274640
2013/8/1HIV-1 M:B_89.6SRX159784SRR528797
2012/8/1HIV-1 M:B_89.6SRX159784SRR528796
2016/11/25Homo sapiens智人PRJNA290142
2017/1/31Dipteryx oleifera香豆油茶PRJNA330734
2015/11/24Influenza A virus (A/Ho甲型流感PRJNA183620
2017/7/1Homo sapiens智人PRJNA352714
2015/5/29Homo sapiens智人PRJNA253335
2017/1/13Homo sapiens智人PRJNA359986
2016/11/30Suid herpesvirus 1 strain猪疱疹病PRJEB17709
2016/7/19Zea mays玉米PRJNA10769
2012/8/1HIV-1 M:B_89.6SRX159795SRR528842
2017/1/9Human immunodeficienc人免疫缺PRJNA356756
2014/4/1Mus musculus小家鼠PRJNA239914
2017/7/11Aedes aegypti埃及伊蚊PRJNA393466
2016/12/20Gadus morhua大西洋鳕PRJEB18628
2012/8/1HIV-1 M:B_89.6SRX159791SRR528828
2016/5/1Sorghum bicolor高粱PRJEB13026
2015/7/20Beta vulgaris subsp. vulg甜菜PRJNA41497
2012/8/1HIV-1 M:B_89.6SRX159790SRR528820
2012/8/1HIV-1 M:B_89.6SRX159790SRR528823
2012/8/1HIV-1 M:B_89.6SRX159790SRR528822
2012/8/1HIV-1 M:B_89.6SRX159791SRR528825
2012/8/1HIV-1 M:B_89.6SRX159790SRR528824
2012/8/1HIV-1 M:B_89.6SRX159791SRR528827
2012/8/1HIV-1 M:B_89.6SRX159791SRR528826
2016/10/13Homo sapiens智人PRJNA298944
2015/10/28Oryza sativa Japonica G粳稻PRJEB8082
2015/1/29Salmonella enterica subs沙门氏菌PRJEB6002
2014/8/4Notothenia coriiceps革首南极PRJNA66471
2017/1/9Homo sapiens智人PRJNA321560
ReleaseDateScientificName中文名字BioProject
2015/3/10Homo sapiens智人PRJNA277461
2015/9/30Zaire ebolavirus扎伊尔埃PRJNA264428
2017/2/17Saccharum hybrid cultiv甘蔗杂交PRJNA356226
2017/4/14Arabidopsis thaliana拟南芥PRJNA382842
2012/8/1HIV-1 M:B_89.6SRX159794SRR528838
2012/8/1HIV-1 M:B_89.6SRX159794SRR528839
2012/8/1HIV-1 M:B_89.6SRX159793SRR528832
2012/8/1HIV-1 M:B_89.6SRX159793SRR528833
2012/8/1HIV-1 M:B_89.6SRX159792SRR528830
2012/8/1HIV-1 M:B_89.6SRX159793SRR528831
2012/8/1HIV-1 M:B_89.6SRX159793SRR528836
2012/8/1HIV-1 M:B_89.6SRX159794SRR528837
2012/8/1HIV-1 M:B_89.6SRX159793SRR528834
2012/8/1HIV-1 M:B_89.6SRX159793SRR528835
2012/8/1HIV-1 M:B_89.6SRX159774SRR530879
2012/6/26Zea mays玉米PRJNA168080
2015/8/28Influenza A virus甲型流感PRJNA253584
2016/8/14Saccharum hybrid cultiv甘蔗杂交PRJNA291816
2015/12/17Triticum aestivum面包小麦PRJNA285723
2017/4/4Nepenthes x hookeriana双色虎克PRJNA299862
2012/8/1HIV-1 M:B_89.6SRX159787SRR528809
2012/8/1HIV-1 M:B_89.6SRX159787SRR528808
2012/8/1HIV-1 M:B_89.6SRX159787SRR528807
2012/8/1HIV-1 M:B_89.6SRX159787SRR528806
2012/8/1HIV-1 M:B_89.6SRX159786SRR528805
2012/8/1HIV-1 M:B_89.6SRX159786SRR528804
2012/8/1HIV-1 M:B_89.6SRX159786SRR528803
2012/8/1HIV-1 M:B_89.6SRX159786SRR528802
2012/8/1HIV-1 M:B_89.6SRX159785SRR528801
2012/8/1HIV-1 M:B_89.6SRX159785SRR528800
2017/1/3Mus musculus小家鼠PRJNA306027
2016/7/26Chenopodium quinoa藜麦PRJNA306026
2016/7/8Homo sapiens智人PRJNA315527
2015/8/13Mus musculus小家鼠PRJEB9114
2016/11/14Schizosaccharomyces p粟酒裂殖PRJNA317011
2016/3/25Schizosaccharomyces p粟酒裂殖PRJNA289903
2016/10/18Triticum aestivum面包小麦PRJEB15048
2015/10/28Plicaturopsis crispa皱褶革菌PRJNA261247
2012/8/1HIV-1 M:B_89.6SRX159787SRR528810
2012/8/1HIV-1 M:B_89.6SRX159788SRR528811
2012/8/1HIV-1 M:B_89.6SRX159788SRR528812
2012/8/1HIV-1 M:B_89.6SRX159788SRR528813
2012/8/1HIV-1 M:B_89.6SRX159788SRR528814
2012/8/1HIV-1 M:B_89.6SRX159789SRR528815
2012/8/1HIV-1 M:B_89.6SRX159789SRR528816
2012/8/1HIV-1 M:B_89.6SRX159789SRR528817
2012/8/1HIV-1 M:B_89.6SRX159789SRR528818
2012/8/1HIV-1 M:B_89.6SRX159790SRR528819
2012/8/1HIV-1 M:B_89.6SRX159783SRR528795
2012/8/1HIV-1 M:B_89.6SRX159783SRR528794
2012/8/1HIV-1 M:B_89.6SRX159782SRR528793
2012/8/1HIV-1 M:B_89.6SRX159782SRR528792
2012/8/1HIV-1 M:B_89.6SRX159781SRR528791
2012/8/1HIV-1 M:B_89.6SRX159781SRR528790
2015/2/26Mus musculus小家鼠PRJNA262902
2014/6/21Homo sapiens智人PRJNA236780
2015/5/11Homo sapiens智人PRJNA267017
2017/4/13Hordeum vulgare大麦PRJEB14446
2016/12/25Hepatitis C virus丙型肝炎PRJNA358253
2016/6/2Gallus gallus原鸡PRJEB13246
2017/6/6Phyllostachys edulis毛竹PRJNA354950
2017/4/12Human alphaherpesvirus人类疱疹PRJNA381128
2016/6/13Triticum aestivum面包小麦PRJNA306427
2016/6/2Gallus gallus原鸡PRJEB13248
2012/8/1HIV-1 M:B_89.6SRX159776SRR530880
2012/8/1HIV-1 M:B_89.6SRX159775SRR530881
2012/8/1HIV-1 M:B_89.6SRX159779SRR528780
2012/8/1HIV-1 M:B_89.6SRX159779SRR528781
2017/3/1Archilochus colubris拟南芥PRJNA369257
2012/8/1HIV-1 M:B_89.6SRX159779SRR528783
2012/8/1HIV-1 M:B_89.6SRX159780SRR528784
2012/8/1HIV-1 M:B_89.6SRX159780SRR528785
2012/8/1HIV-1 M:B_89.6SRX159781SRR528786
2012/8/1HIV-1 M:B_89.6SRX159781SRR528787
2012/8/1HIV-1 M:B_89.6SRX159781SRR528788
2012/8/1HIV-1 M:B_89.6SRX159781SRR528789
2015/9/2Homo sapiens智人PRJNA268670
2017/1/23Mus musculus小家鼠PRJNA362590
2014/5/30Propithecus coquereli智人PRJNA239248
2012/8/1HIV-1 M:B_89.6SRX159792SRR528829
2015/10/5Salvia miltiorrhiza丹参PRJNA266375
2012/8/1HIV-1 M:B_89.6SRX159779SRR528779
2012/8/1HIV-1 M:B_89.6SRX159779SRR528778
2012/8/1HIV-1 M:B_89.6SRX159778SRR528775
2012/8/1HIV-1 M:B_89.6SRX159778SRR528774
2012/8/1HIV-1 M:B_89.6SRX159778SRR528777
2012/8/1HIV-1 M:B_89.6SRX159778SRR528776
2012/8/1HIV-1 M:B_89.6SRX159779SRR528782
2012/8/1HIV-1 M:B_89.6SRX159777SRR528773
2012/8/1HIV-1 M:B_89.6SRX159777SRR528772
2017/3/10Rosellinia necatrix白纹羽病PRJNA358652
2013/8/12Homo sapiens智人PRJEB3969
2016/8/29Lagenidium giganteum大链壶菌PRJNA256125
2017/3/10Fragaria vesca野草莓PRJNA320931
2012/5/6Homo sapiens智人PRJNA85103
2015/10/28Sorghum bicolor高粱PRJEB10584
2016/5/19Homo sapiens智人PRJNA301527
2017/7/3Bos taurus牛PRJNA386670
2017/6/21Panax ginseng人参PRJNA391203
2017/3/7Amborella trichopoda无油樟PRJNA374048
2012/8/1HIV-1 M:B_89.6SRX159790SRR528821
2017/4/18Human alphaherpesvirus人类疱疹PRJNA382882
2017/3/21Gossypium barbadense海岛棉PRJNA359724
2014/11/28Homo sapiens智人PRJNA260556
2017/4/29Rattus norvegicus褐家鼠PRJNA320100
2016/7/17Pinus lambertiana糖松PRJNA174450

  • 发表于 2017-07-26 09:27
  • 阅读 ( 6280 )
  • 分类：转录组学

你可能感兴趣的文章

相关问题

0 条评论

请先 登录 后评论
不写代码的码农
张海伦

生物信息分析员

31 篇文章

作家榜 »

  1. 祝让飞 118 文章
  2. 柚子 91 文章
  3. 刘永鑫 64 文章
  4. admin 57 文章
  5. 生信分析流 55 文章
  6. SXR 44 文章
  7. 张海伦 31 文章
  8. 爽儿 25 文章

张海伦

如果觉得我的文章对您有用，请随意打赏。你的支持将鼓励我继续创作！